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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 32,881
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000011712
Taxonomy9685 - Felis catus
StrainAbyssinian
Last modifiedSeptember 28, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000181335.4 from Ensembl

The domestic cat is the smallest mammal in the family Felidae. Cats are active agile hunters with fast reflexes and particularly keen eyesight. They have strong, flexible bodies, sharp teeth and retractable claws. Recent archaeological findings suggest that cat-human cohabitation started almost 10,000 years ago in the Near East. The cats is widely used as a model organism for biomedical research, especially in the fields of neuroscience, endocrinology, behavioral biology and reproductive physiology.

The cat genome has 19 chromosomes containing 2.7 Gb with 20,000 protein-coding genes. The reference proteome is derived from the genome sequence published in 2007.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome A12136
Chromosome A22606
Chromosome A31870
Chromosome B11806
Chromosome B21745
Chromosome B32093
Chromosome B42132
Chromosome C13213
Chromosome C21600
Chromosome D12215
Chromosome D21052
Chromosome D31220
Chromosome D41252
Chromosome E11816
Chromosome E21669
Chromosome E31045
Chromosome F11154
Chromosome F2685
Chromosome X1236
Unplaced
337
Mitochondrion13

Publications

  1. "Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome."
    Lopez J.V., Cevario S., O'Brien S.J.
    Genomics 1996:229-246(1996) [PubMed] [Europe PMC] [Abstract]
  2. "Sequence assembly of the Felis catus genome version 6.2."
    Hillier L.W., Warren W., Obrien S., Wilson R.K.
    Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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